Amborella trichopoda

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The table below shows statistics for each Amborella cDNA library that has been sequenced using 454 pyrosequencing technology. Assemblies can be found here

Tissue Namesort icon Library Code Sequencing Date Sequencing Method Number of Reads Passing Reads Total passing bases
Apical meristem - Atr12 Atr12 Thu, 2008-11-06 454 FLX Titanium 794746 Sequences 688305 Sequences 201.90 MB
Male flowers - Atr15 Atr15 Wed, 2010-01-20 454 FLX Titanium 277023 Sequences 255213 Sequences 73.49 MB
Old leaves - Atr14 Atr14 Wed, 2010-01-20 454 FLX Titanium 280097 Sequences 260563 Sequences 73.49 MB
Old Stem - Atr13 Atr13 Tue, 2009-12-15 454 FLX Titanium 259431 Sequences 238156 Sequences 68.70 MB
Pre meiotic female flower buds - Atr10 Atr10 Tue, 2008-01-01 454 FLX GS 895000 Sequences 812325 Sequences 176.97 MB
Premeiotic female flower bud - Atr02 Atr02 Tue, 2008-01-01 Sanger 4364 Sequences 4336 Sequences 2.32 MB
Premeiotic female flower bud - Atr02b Atr02b Tue, 2008-01-01 Sanger 8899 Sequences 8805 Sequences 4.85 MB
Premeiotic male flower bud - Atr01 Atr01 Tue, 2008-01-01 Sanger 4243 Sequences 4188 Sequences 2.31 MB
Premeiotic male flower bud - Atr01b Atr01b Tue, 2008-01-01 Sanger 21100 Sequences 20818 Sequences 11.86 MB
Root - Atr11 Atr11 Sun, 2008-06-01 454 FLX GS 324070 Sequences 300275 Sequences 64.88 MB
Stem - Atr16 Atr16 Mon, 2010-02-22 454 FLX Titanium 410098 Sequences 388436 Sequences 120.03 MB
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Number of Sequence Libraries: 
10
NCBI Taxon ID: 
13333