Liriodendron

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Liriodendron tulipifera

The table below shows statistics for each Liriodendron cDNA library that has been sequenced using 454 pyrosequencing technology. Assemblies can be found here Add a tissue page: Click here
Illumina RNAseq data are also available normalized cDNA libraries derived from whole plants (LtuWPN)and cambium (LtuCAB) here .

Number of Sequence Libraries: 
12

Cambium - Ltu10

SFF file name: FFED3EY01.sff
md5sum: 165f8d533a11c3611281b12078fcbaf7
 

Library Code: 
Ltu10
Sequencing Date: 
Tue, 2008-09-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Terminal bud - Ltu11

SFF file name: FFED3EY02.sff
md5sum: 2c2fda3e43cfca8880ad2c736b51c03d
 

Library Code: 
Ltu11
Sequencing Date: 
Tue, 2008-09-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Fruit combo - Ltu12

SFF file name: FJKHB0001.sff
md5sum : d8c8cff23994a54eb6313ec95de725c0
 

Library Code: 
Ltu12
Sequencing Date: 
Tue, 2008-11-04
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Leaves combo - Ltu13

SFF File name: FJKHB0002.sff
md5sum: be659d9d0e621ba168e1b0eac2455d96
 
*70/30 young leaves/ mature leaves combo

Library Code: 
Ltu13
Sequencing Date: 
Tue, 2008-11-04
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Open flower - Ltu14

 SFF File name: FJTO7WT01.sff
 md5sum: 0c659b3be01096fd00fc330fdfc6d8e2
 

Library Code: 
Ltu14
Sequencing Date: 
Fri, 2008-11-07
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Post meiotic flower buds - Ltu15

SFF File name: FJTO7WT02.sff
md5sum: d40e01bf65fd860999662c2428c6908c
 

Library Code: 
Ltu15
Sequencing Date: 
Fri, 2008-11-07
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Root - Ltu16

 SFF File name; FJY2ONO01.sff
 md5sum: 4fb43cb042128c9b36cf1cd0a01874ad
 

Library Code: 
Ltu16
Sequencing Date: 
Tue, 2008-11-11
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Seedlings - Ltu17

 SFF File name: FJY2ONO02.sff
 md5sum: 1771692c65c6db2c11791e668ffe7402
 

Library Code: 
Ltu17
Sequencing Date: 
Mon, 2008-11-10
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Xylem - Ltu18

 SFF File name: FQA4I6C01.sff
 md5sum: cbd25a90bf29bc652b6fa002d9d8af95
 

Library Code: 
Ltu18
Sequencing Date: 
Mon, 2009-02-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Pre meiotic flower buds - Ltu19

 SFF File name: FQA4I6C02.sff
 md5sum: 2b9af9fae6fc774b03cedb832dcca047
 

Library Code: 
Ltu19
Sequencing Date: 
Mon, 2009-02-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Pre meitotic flower bud - Ltu01

Library Code: 
Ltu01
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Pre meitotic flower bud - Ltu01b

Library Code: 
Ltu01b
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Pre meitotic flower bud - Ltu01b

Library Code: 
Ltu01b
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Pre meitotic flower bud - Ltu01

Library Code: 
Ltu01
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Seedlings - Ltu17

 SFF File name: FJY2ONO02.sff
 md5sum: 1771692c65c6db2c11791e668ffe7402
 

Library Code: 
Ltu17
Sequencing Date: 
Mon, 2008-11-10
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Cambium - Ltu10

SFF file name: FFED3EY01.sff
md5sum: 165f8d533a11c3611281b12078fcbaf7
 

Library Code: 
Ltu10
Sequencing Date: 
Tue, 2008-09-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Xylem - Ltu18

 SFF File name: FQA4I6C01.sff
 md5sum: cbd25a90bf29bc652b6fa002d9d8af95
 

Library Code: 
Ltu18
Sequencing Date: 
Mon, 2009-02-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Fruit combo - Ltu12

SFF file name: FJKHB0001.sff
md5sum : d8c8cff23994a54eb6313ec95de725c0
 

Library Code: 
Ltu12
Sequencing Date: 
Tue, 2008-11-04
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Leaves combo - Ltu13

SFF File name: FJKHB0002.sff
md5sum: be659d9d0e621ba168e1b0eac2455d96
 
*70/30 young leaves/ mature leaves combo

Library Code: 
Ltu13
Sequencing Date: 
Tue, 2008-11-04
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Root - Ltu16

 SFF File name; FJY2ONO01.sff
 md5sum: 4fb43cb042128c9b36cf1cd0a01874ad
 

Library Code: 
Ltu16
Sequencing Date: 
Tue, 2008-11-11
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Terminal bud - Ltu11

SFF file name: FFED3EY02.sff
md5sum: 2c2fda3e43cfca8880ad2c736b51c03d
 

Library Code: 
Ltu11
Sequencing Date: 
Tue, 2008-09-02
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit
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