Aristolochia

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Aristolochia fimbriata

The table below shows statistics for each Aristolochia cDNA library that has been sequenced using 454 pyrosequencing technology. Assemblies can be found here
Add a tissue page: Click here
Illumina RNAseq data are also available normalized cDNA libraries derived from whole plants (AfiWPN), drought-stressed plants (AfiDrought) and callus (AfiCallus) here .

Number of Sequence Libraries: 
13

Fruit (Early stage) - AFCG

Library Code: 
AFCG
Sequencing Date: 
Wed, 2008-11-05
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Fruit (Late stage developing) - AFBD

Library Code: 
AFBD
Sequencing Date: 
Fri, 2008-02-22
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Mature leaves - AFCC

Library Code: 
AFCC
Sequencing Date: 
Fri, 2008-11-07
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Open flower - AFBE

Library Code: 
AFBE
Sequencing Date: 
Mon, 2008-01-07
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Post meiotic flower buds - AFCD

Library Code: 
AFCD
Sequencing Date: 
Wed, 2008-08-06
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Pre meiotic flower buds - AFCP

Library Code: 
AFCP
Sequencing Date: 
Tue, 2009-03-17
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Root - AFCA

Library Code: 
AFCA
Sequencing Date: 
Fri, 2008-10-24
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Seedling early stage - AFCH

Library Code: 
AFCH
Sequencing Date: 
Wed, 2008-05-14
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Seedlings - AFBG

Library Code: 
AFBG
Sequencing Date: 
Fri, 2008-07-18
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Terminal bud - AFCF

Library Code: 
AFCF
Sequencing Date: 
Tue, 2009-09-15
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Premeitotic flower bud Afi04

Library Code: 
Afi04
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Mix: roots, leaves, flower buds, flowers at anthesis, terminal buds and stem tissue, fruit, and seedlings - Afi06

Library Code: 
Afi06
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Young leaves - AFCB

Library Code: 
AFCB
Sequencing Date: 
Tue, 2008-04-22
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Mix: roots, leaves, flower buds, flowers at anthesis, terminal buds and stem tissue, fruit, and seedlings - Afi06

Library Code: 
Afi06
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Premeitotic flower bud Afi04

Library Code: 
Afi04
Sequencing Date: 
Tue, 2008-01-01
Sequencing Method: 
Sanger
Sequence Information
Number of Plates: 
1.00 Plates

Fruit (Early stage) - AFCG

Library Code: 
AFCG
Sequencing Date: 
Wed, 2008-11-05
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Mature leaves - AFCC

Library Code: 
AFCC
Sequencing Date: 
Fri, 2008-11-07
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Terminal bud - AFCF

Library Code: 
AFCF
Sequencing Date: 
Tue, 2009-09-15
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Seedling early stage - AFCH

Library Code: 
AFCH
Sequencing Date: 
Wed, 2008-05-14
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Pre meiotic flower buds - AFCP

Library Code: 
AFCP
Sequencing Date: 
Tue, 2009-03-17
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
0.50 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Young leaves - AFCB

Library Code: 
AFCB
Sequencing Date: 
Tue, 2008-04-22
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit

Root - AFCA

Library Code: 
AFCA
Sequencing Date: 
Fri, 2008-10-24
Sequencing Method: 
454 FLX GS
Sequence Information
Number of Plates: 
1.00 Plates
Library Information
Strategy: 
EST
Source: 
NON-GENOMIC
Selection: 
cDNA
Layout: 
FRAGMENT
Library Construction protocol: 
Roche 454GS FLX library kit
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