|
MAGIC Sanger Sequence
Viewer
MAGIC
Sequence Viewer
allows
the view of base calls,
phred scores, and 6-frame
translations for traditional EST sequences. One can download selected
data in fasta format and BLAST search NCBI databases with individual sequences. Library discriptions can be found here
MAGIC Sanger
GeneDiscovery
MAGIC
GeneDiscovery
allows
the user to explore assemblies of traditional ESTs (read
alignments, BLAST-based annotations
etc.), explore SNPs, 3'/5'
EST content of contigs,
standalone BLAST
query/visualization, AT/GC
content
NG-MAGIC Sanger-454
hybrid
GeneDiscovery
NG-MAGIC
GeneDiscovery
is an extension of MAGIC GeneDiscovery that allows exporation of
very large, hybrid sanger-454 assemblies
Local Blast
Blast to
Consensus Sequences
allows the user to enter
sequences that may be
Blasted against the set of
EST consensus sequence assemblies for all species included in the Ancestral Angiosperm Project (Amborella trichopoda, Aristolochia fimbriata, Liriodendron tulipifera, Nuphar advena, Persea americana, Saruma henryi,
and Zamia vazquezii). See assembly descriptions here .
|